Efficient CAR Positive Rate Detection! FAC2 antibodies for Anti-G4S Linker and Whitlow/218 Linker Are Ready to Help You!

Efficient CAR Positive Rate Detection! FAC2 antibodies for Anti-G4S Linker and Whitlow/218 Linker Are Ready to Help You!

CAR-T cell therapy, also known as Chimeric Antigen Receptor T-cell therapy, is a revolutionary immunotherapy. CAR-T therapy involves the use of genetic engineering techniques to introduce the chimeric antigen receptor (CAR) gene into the patient's T cells. The CAR is composed of a single-chain variable fragment (scFv), which can recognize and bind to specific antigens on the surface of tumor cells. When CAR-T cells recognize tumor antigens, they activate the cytotoxic function of T cells, releasing cytotoxins such as perforin and granzymes, directly killing tumor cells. In addition, CAR-T cells can also activate other immune cells by releasing cytokines, enhancing the overall anti-tumor response. As an emerging immunotherapy, CAR-T cell therapy has shown great potential and broad application prospects in the field of cancer treatment.

 

Introduction to CAR Structure

The structure of CAR consists of three main parts: the extracellular domain, the transmembrane domain, and the intracellular signaling domain.

  

Extracellular Domain

√ Antigen recognition region: It usually composed of a single-chain variable fragment (scFv), which is formed by connecting the variable heavy chain (VH) and variable light chain (VL) of an antibody through a flexible linker. The scFv endows CAR with the ability to specifically recognize and bind to target antigens.

√ Hinge region: It cConnects the scFv and the transmembrane domain, providing structural flexibility and stability. The length and source of the hinge region (such as IgG hinge or CD8α/CD28 extracellular domain) can affect the function of CAR.

  

Transmembrane Domain

Function: It anchors CAR on the cell membrane, ensuring stable expression of CAR. The design of the transmembrane domain has an important impact on the expression level and stability of CAR.

 

Intracellular Signaling Domain

√Signaling transduction domain: It usually contains the CD3ζ chain, providing T-cell receptor activation signals.

√Costimulatory domain: To enhance the activation and persistence of CAR-T cells, the second-generation CAR introduced costimulatory domains, such as CD28 or 4-1BB. These costimulatory signals help improve the proliferation and effector function of CAR-T cells.

 

  

Illustration of CAR Structure

 G4S linker and Whitlow/218 Linker are the two most common flexible linkers.

√ G4S linker is a commonly used flexible amino acid chain, usually composed of glycine (Gly, G) and serine (Ser, S), with the sequence (GGGGSGGGGSGGGGS), abbreviated as (G4S)3. This sequence does not lead to the formation of specific secondary structures, and is therefore widely used in protein fusion. The main function of G4S linker is to connect different protein domains, providing structural flexibility to reduce the mutual influence between different domains. In CAR cell therapy, G4S linker is used to connect the variable heavy chain (VH) and variable light chain (VL) in the single-chain variable fragment (scFv), forming a flexible structure. This design helps improve the recognition ability and function of CAR cells.

√ Whitlow/218 Linker mainly used to connect the variable heavy chain (VH) and variable light chain (VL) in the single-chain variable fragment (scFv). Its sequence is based on the research published by Whitlow et al. in 1993, aiming to improve the stability and functionality of scFv. The specific sequence of Whitlow/218 Linker is GSTSGSGKPGSGEGSTKG. In CAR cell therapy, the use of Whitlow/218 Linker can increase the affinity of scFv for tumor antigens. This is very important for the targeting ability and therapeutic effect of CAR-T cells, because higher affinity means that CAR-T cells can more effectively recognize and bind to tumor cells. It also helps reduce the aggregation and degradation of scFv, thereby improving the stability and functionality of CAR-T cells. This is crucial for maintaining the persistence and activity of CAR-T cells in the body.

 

Comparison of different CAR detection methods

Level

Method

Detection Mechanism

Advantages

Disadvantages

Genome

 

qPCR

Based on the upstream and downstream sequences of the CAR structural enzyme cleavage site and the intracellular domain of CAR as a template for primer design

High sensitivity and specificity, can measure CAR vector delivery efficiency, on-treatment

expansion kinetics, and persistence to predict clinical response

Requires known concentration standards and cannot differentiate subtle copy number differences.

Some CAR-T products like Relmacabtagene autoleucel lack effective primers and probes

 

 

Digital PCR

Higher sensitivity, can achieve absolute quantification without making standard curves

Relatively high equipment cost

Transcriptome

RNAseq

Detection of CAR mRNA sequence

Can distinguish  CAR-T and non-CAR-T cells during analysis, help characterize

how viral promoters influence CAR transcription and in vivo differentiation

 

Cannot capture factors that

influence CAR translation, such as ribosome, initiation factors,

and amino acid availability

 

RNAscope Hybridization

spatial resolution spanning the single-molecule and cellular

levels;ability to probe subcellular mRNA localization;

capability for multiplex detection; and compatibility

with microscopy

 

Can correlate the number of CAR mRNA in CAR-T cells with the relative position of CAR-T cells in tissue samples

Cannot be used for live cell RNA imaging

Protein

Protein L

Binding to the k light chain of antibodies

Has a certain level of universality, can detect CARs with different targets

Can only recognize human VkIVkIII and VkIV subtypes and mouse VKI subtype, but not human VkII subtype and other subtypes of mouse Ig light chains

Anti-Fab Antibody

Binding to the Fab segment of antibodies

Has a certain level of universality, can detect CARs with different targets

High background, inconsistent quality among commercial products, mostly polyclonal, with poor batch-to-batch consistency

Anti-idiotype Antibody

Specific binding to the antigen recognition region of scFv

High specificity, high sensitivity, low background

Few commercial products available, requires custom development, with a long customization period (about 6 months)

Target Protein

Specific binding to the antigen recognition region of scFv

Has target specificity, can evaluate the binding ability of CAR to the target

Detection sensitivity is limited by the affinity between scFv and the target protein

Linker-specific Antibody

Binding to the flexible linker

Has a certain level of universality, easy to operate, can detect CARs with different targets

CAR structure design needs to include the specific linker

 

Rabbit recombinant monoclonal antibodies specifically targeting G4S linker and Whitlow/218 Linker can be used for the detection and analysis of CAR-T and other cells containing these linkers. This is very useful in the research and development process of CAR-T and other cell therapies. Starter Bio launched G4S linker and Whitlow/218 Linker FACS antibodies for CAR positive rate detection and functional assessment.

  

Performance

Flow cytometric analysis ScFv based CAR containing a G4S linker transfected 293T (Human embryonic kidney epithelial cell) (Right panel) or 293T (Left panel) was stained with SDT G4S Linker Recombinant Rabbit mAb (Alexa Fluor® 488 Conjugate) at 0.1 μg/test. Flow cytometry and data analysis were performed using BD FACSymphony™ A1 and FlowJo™ software.

Flow cytometric analysis ScFv based CAR containing a  Whitlow/218 linker transfected 293T (Human embryonic kidney epithelial cell, Right panel) or 293T (Left panel) was stained with SDT Whitlow/218 Linker Recombinant Rabbit mAb (Alexa Fluor® 647 Conjugate) at 0.01 μg/test. Flow cytometry and data analysis were performed using BD FACSymphony™ A1 and FlowJo™ software.

         

Product Information

Gatalog Num Product Name Product Parameters Price
S0B1723 G4S Linker Recombinant Rabbit mAb (Pacific blue Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Pacific Blue
S0B1724 G4S Linker Recombinant Rabbit mAb (APC Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : APC
S0B1721 G4S Linker Recombinant Rabbit mAb (Biotin Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Biotin
S0B1711 G4S Linker Recombinant Rabbit mAb (Alexa Fluor® 555 Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Alexa Fluor® 555
S0B1710 G4S Linker Recombinant Rabbit mAb (Alexa Fluor® 594 Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Alexa Fluor® 594
S0B1708 G4S Linker Recombinant Rabbit mAb (Alexa Fluor® 647 Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Alexa Fluor® 647
S0B1793 Whitlow/218 Linker Recombinant Rabbit mAb (Alexa Fluor® 488 conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : Alexa Fluor® 488
S0B1794 Whitlow/218 Linker Recombinant Rabbit mAb (Alexa Fluor® 555 conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : Alexa Fluor® 555
S0B1795 Whitlow/218 Linker Recombinant Rabbit mAb (Alexa Fluor® 594 conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : Alexa Fluor® 594
S0B1796 Whitlow/218 Linker Recombinant Rabbit mAb (Alexa Fluor® 647 conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : Alexa Fluor® 647
S0B1797 Whitlow/218 Linker Recombinant Rabbit mAb (APC conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : APC
S0B1799 Whitlow/218 Linker Recombinant Rabbit mAb (Biotin conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : Biotin
S0B1789 Whitlow/218 Linker Recombinant Rabbit mAb (PE-Cy7 conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : PE-Cy7
S0B1275 Whitlow/218 Linker Recombinant Rabbit mAb (S-712-10) Host : Rabbit Inquiry
Conjugation : Unconjugated
S0B1788 Whitlow/218 Linker Recombinant Rabbit mAb (PE conjugate) (S-712-10) Host : Rabbit Inquiry
Conjugation : PE
S0B1178 G4S Linker Recombinant Rabbit mAb (S-711-23) Host : Rabbit $100 
Conjugation : Unconjugated
S0B1709 G4S Linker Recombinant Rabbit mAb (Alexa Fluor® 488 Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : Alexa Fluor® 488
S0B1725 G4S Linker Recombinant Rabbit mAb (PE Conjugate) (S-711-23) Host : Rabbit $420 
Conjugation : PE