2.3 Intracellular Factor Staining Case
12 Feb 2026
by ma kun
Human Peripheral Blood Th1/Th2/Th17 Subset Detection
1. Experimental Materials
1.1 Laboratory Equipment
- Consumables & Instruments: Flow cytometry tubes, 6-well cell culture plates
- Incubation System: 37°C, 5% CO₂ cell incubator
- Processing Devices: Vortex mixer, palm microcentrifuge, horizontal rotor centrifuge
- Detection Platform: Flow cytometer
1.2 Experimental Reagents
- Heparinized whole blood
- RPMI-1640 medium, fetal bovine serum (FBS)
- Human peripheral blood lymphocyte separation medium
- Sterile phosphate buffered saline (PBS)
- Stimulant cocktail: PMA/Ionomycin + BFA/Monensin
2. Standard Protocol
2.1 PBMC Isolation
- Transfer 4 mL fresh heparinized whole blood and isolate peripheral blood mononuclear cells (PBMCs) using lymphocyte separation medium.
- Carefully aspirate the PBMC layer located beneath the plasma and transfer the cell suspension into a 15 mL centrifuge tube.
- Dilute cells to 8 mL total volume with RPMI-1640 medium, invert to mix, and centrifuge at 250×g, 20°C for 10 min.
- Discard supernatant, resuspend cell pellet in 3 mL RPMI-1640 supplemented with 10% FBS, count viable cells and set aside for subsequent stimulation.
2.2 PBMC Stimulation
- Label a 6-well plate as unstimulated control and stimulated groups. Add 1 mL PBMC suspension to each well, then supplement with 1 mL 10% FBS RPMI-1640; mix gently without bubble formation.
- Add 4 μL stimulant cocktail to each stimulated well, pipette thoroughly to mix and minimize air bubbles.
- Incubate the plate at 37°C under 5% CO₂ for 5 h.
- After incubation, collect cells into centrifuge tubes and centrifuge at 350×g for 5 min; discard supernatant.
- Rinse each well with 1 mL RPMI-1640, combine rinse solution with corresponding cell pellets, centrifuge at 350×g for 5 min and remove supernatant.
- Resuspend pellets in 2 mL Staining Buffer, centrifuge at 350×g for 5 min, discard supernatant, and reconstitute each tube with 1 mL Staining Buffer.
2.3 Fc Blocking & Cell Surface Staining
- Aliquot cell suspension into separate tubes for control and stimulated groups, 100 μL per tube.
- Add 2.5 μg human Fc receptor blocking reagent to each tube, mix and incubate at room temperature (RT) for 10 min to block non-specific antibody binding.
- Add matched surface marker antibodies to respective tubes, mix well, and incubate in the dark at RT for 15 min.
- Dilute with 2 mL Staining Buffer, centrifuge at 350×g for 5 min, discard supernatant.
2.4 Fixation, Permeabilization & Intracellular Cytokine Staining
- Resuspend fixed-permeabilized cell pellets in 100 μL Perm/Wash Buffer, add IFN-γ and IL-4 antibodies per tube layout, and incubate protected from light at RT for 20 min.
- Perform two washes with Staining Buffer; each wash consists of 350×g centrifugation for 5 min followed by supernatant removal.
- Final resuspension: reconstitute stained cells in 0.3 mL Staining Buffer for flow cytometric acquisition.
3. Data
All intracellular cytokine staining data were acquired using the Human Th1/Th2/Th17 Phenotyping Kit on an LSR II flow cytometer. All dot plots were gated on CD4⁺ T lymphocyte populations.
Three sample groups are displayed in columns from left to right: resting unstimulated PBMCs, PMA/Ionomycin-stimulated PBMCs, and fully polarized Th17 cells. Two plot panels are provided per group:
- Top row: IL-17A vs IFN-γ co-expression
- Bottom row: IL-17A vs IL-4 co-expression

Figure 1. Th1/Th2/Th17 intracellular cytokine dot plots gated on CD4⁺ T cells
Notes
- Avoid vigorous pipetting during all cell transfer steps to prevent cell rupture.
- All antibody incubation steps must be performed in the dark to preserve fluorophore stability.
- Critical parameter: Strictly maintain incubation time and centrifugation speed/temperature to ensure consistent assay reproducibility.