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UniOne® TR-FRET Human RAK4/CRBN PROTAC Binding KIT

UniOne® TR-FRET Human RAK4/CRBN PROTAC Binding KIT

Catalog Number: UA086005 Brand: UA BIOSCIENCE
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Regular price $2,180 USD
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Product Details

Product Specification


Host Human
Stability & Storage

-80℃

Background

This kit utilizes Time-Resolved Fluorescence ResonanceEnergy Transfer (TR-FRET) technology to measure the interaction between IRAK4and CRBN mediated by the molecular glue PROTAC IRAK4 DEGRADER-1 and testcompounds. This method provides a simple, rapid, and high-throughput format fordetecting small molecules capable of mediating IRAK4-CRBN interactions.

As shown, the interaction between IRAK4 and CRBN isdetected using an anti-Tag1 antibody labeled with Eu (TR-FRET donor) and ananti-Tag2 antibody labeled with Ac (TR-FRET acceptor). Since the molecular gluePROTAC IRAK4 DEGRADER-1 mediates the interaction between IRAK4 and CRBN, thedonor and acceptor antibodies are brought into proximity. Excitation of thedonor antibody triggers fluorescence resonance energy transfer (FRET) to theacceptor antibody, resulting in specific emission of a 665 nm signal. Thisspecific signal is proportional to the degree of interaction between PROTACIRAK4 DEGRADER-1, IRAK4, and CRBN. This homogeneous assay is simple to performand requires no wash steps.



Components

 

Component

Concentration

100 TESTS

500 TESTS

2500 TESTS

10000 TESTS

Storage

Tag1-IRAK4 protein

50×

8 μL

40 μL

200 μL

800 μL

-80°C

Tag2-DDB1/CRBN protein

50×

8 μL

40 μL

200 μL

800 μL

-80°C

PROTAC IRAK4 degrader-1

100×

3 μL

5 μL

25 μL

125 μL

-80°C

Anti-Tag1 Eu dye antibody

50×

10 μL

50 μL

250 μL

1000 μL

-80°C

Anti-Tag2 Ac antibody

12.5×

40 μL

200 μL

1000 μL

5000 μL

-80°C

Detection buffer

10×

1 mL

2 mL

6 mL

25 mL

-80°C

*Avoid repeated freeze-thaw cycles of reagents. Recommend aliquoting after first thaw and storing according to conditions specified for a shelf life of one year.

Protocol


1. Reagent Preparation

Thaw all reagents at room temperature (equilibrate at room temperature for at least 30 min) before use. The reaction system for a 384-well shallow plate is 20 μL (reagent volumes per well shown in table). Calculate the required volume based on your experimental needs and prepare accordingly. The following preparation is for reference only, using the 500-test kit as an example.

1.1 Buffer (1×):
Add 18 mL sterile water to 2 mL Detection buffer (10×) and mix well.

Table 2. Reagent Preparation and Volumes

Reagent Name

Preparation

Volume per well (μL)

PROTAC IRAK4 DEGRADER-1

Dilute compound to test concentration using 1× Detection buffer according to the reaction system.

2

Tag1-IRAK4 protein

Take 40 μL Tag1-IRAK4 protein stock, dilute to 2 mL with 1× Detection buffer, mix well and set aside.

4

Tag2-DDB1/CRBN protein

Take 40 μL Tag2-DDB1/CRBN protein stock, dilute to 2 mL with 1× Detection buffer, mix well and set aside.

4

Antibody Mix

Take 50 μL Anti-Tag1 Eu dye antibody stock, add 1× Detection buffer to 2.5 mL, mix well; take 200 μL Anti-Tag2 Ac antibody stock, add 1× Detection buffer to 2.5 mL, mix well. Combine 1:1 to make Antibody Mix.

10

1.2 Dilution of Test Samples

Using PROTAC IRAK4 DEGRADER-1 as an example, diluent is 1× Detection buffer. To minimize matrix interference, it is recommended to dilute with the same matrix as the test sample; adjust based on actual sample concentration.

Table 3. Sample Dilution Series

 

Final PROTAC IRAK4 DEGRADER-1 Concentration (nM)

Prepared PROTAC IRAK4 DEGRADER-1 Concentration (nM)

Preparation Method

1

150

1500

2 μL of 150 μM stock + 198 μL 1× Detection buffer

2

75

750

50 μL of ① + 50 μL 1× Detection buffer

3

37.5

375

50 μL of ② + 50 μL 1× Detection buffer

4

18.75

187.5

50 μL of ③ + 50 μL 1× Detection buffer

5

9.38

93.75

50 μL of ④ + 50 μL 1× Detection buffer

6

4.69

46.88

50 μL of ⑤ + 50 μL 1× Detection buffer

7

2.34

23.44

50 μL of ⑥ + 50 μL 1× Detection buffer

8

1.17

11.72

50 μL of ⑦ + 50 μL 1× Detection buffer

9

0.59

5.86

50 μL of ⑧ + 50 μL 1× Detection buffer

Blank

0

0

100 μL 1× Detection buffer

2. Sample and Control Setup

2.1 Pipetting order for assay wells: Add 4 μL Tag1-IRAK4 protein working solution, 2 μL test sample, then add 4 μL Tag2-DDB1/CRBN protein working solution, and 10 μL mixed Antibody Mix sequentially into a 384-well shallow plate.

2.2 Minimum Control Wells: Use 2 μL 1× Detection buffer in place of the test sample.

2.3 Maximum Control Wells: Use 2 μL 40000 nM PROTAC IRAK4 DEGRADER-1 in place of the test sample.

2.4 NC (Eu only): Add 16 μL 1× Detection buffer + 4 μL diluted Anti-Tag1 Eu dye antibody.

Table 4. Plate Layout and Controls

 

Minimum Control

Maximum Control

Sample

NC

Step 1

2μL

1× Detection buffer

2μL

1500nM PROTAC IRAK4 DEGRADER-1

2μL

Serial dilution of test sample

15μL 1× Detection buffer

add 5μL 1×Anti-Tag1 Eu dye antibody

4μL Tag1-IRAK4 protein

Step 2

4μL Tag2-DDB1/CRBN protein

10μL Antibody Mix

Seal plate with plate sealer and incubate at room temperature for 2 hours

*For negative controls and NC, it is recommended to use matrix-matched solution instead of 1× Detection buffer.

3. Detection

Read on a TR-FRET-compatible plate reader (excitation 320 nm, emission detection at 620 nm and 665 nm).

[Data Analysis]

Calculate Signal Value:
Signal Value = (665 nm fluorescence / 620 nm fluorescence) × 10,000

 

Calculate Net Signal:
Net Signal = (Std – NC) / NC × 100

 

Calculate CV (%):
CV (%) = (Standard Deviation / Mean Ratio) × 100%

 

[Example Data]

The following data are for illustrative purposes only and cannot replace data obtained from your experiment. Results may vary depending on the TR-FRET-compatible instrument used.

PROTAC IRAK4 degrader-1 (nM)

Average Ratio

CV

Average Net Signal

125

231.3

5.0%

621.35

62.5

225.4

5.7%

602.95

31.25

169.4

2.7%

428.30

15.625

102.335

5.2%

219.15

7.8125

63.97

0.4%

99.50

3.90625

50.34

11.3%

56.99

0 (DMSO)

38.455

4.1%

19.93

Eu + AC

32.155

2.9%

0.28

S/B

6.01

 

 

IC₅₀

 

 

23.96

 

Picture

Bioactivity

Standard curve