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UniOne® TR-FRET Human KRAS[G12D]/VHL PROTAC Binding Kit

UniOne® TR-FRET Human KRAS[G12D]/VHL PROTAC Binding Kit

Catalog Number: UA086161 Brand: UA BIOSCIENCE
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Regular price $730 USD
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Product Details

Product Specification


Host Human
Stability & Storage

-80℃

Background

The kit is based on homogeneous time-resolved fluorescence technology (TR-FRET) technology,which is used to assess the molecular-mediated interaction between the KRAS[G12D] and VHL.This method provides a high-throughput approach to detect the small molecules capable of mediating the interaction between the KRAS[G12D] and VHL simply and rapidly.

As shown in the figure below, the interaction between KRAS[G12D] and VHL was detected by an Eu-labeled anti-Tag1 antibody (TR-FRET donor) and an Ac-labeled anti-Tag2 antibody (TR-FRET receptor). Since the PROTAC molecule ACBI3 mediates the interaction between KRAS[G12D] and VHL, the donor antibody is in close proximity to the receptor antibody. Excitation of the donor antibody triggers fluorescence resonance energy transfer (FRET) to the receptor antibody, resulting in specific emission of a signal at a wavelength of 665 nm from the receptor antibody. This specific signal is proportional to the degree of interaction between ACBI3 , KRAS[G12D] and VHL. This homogeneous assay is simple to perform and requires no washing steps.

Components

【Composition and Storage Conditions】

Composition

concentration

100T

500T

2500T

10000T

Storage

Tag1-KRAS[G12D] protein

100×

5μL

20μL

100μL

400μL

-80℃

Tag2-VHL protein

50×

8μL

40μL

200μL

800μL

-80℃

ACBI3

8 mM

5μL

10μL

50μL

200μL

-80℃

Anti-Tag1 Eu antibody

5

10μL

50μL

250μL

1000μL

-80℃

Anti-Tag2 Ac antibody

12.5×

40μL

200μL

1mL

4mL

-80℃

Detection buffer

10×

400μL

2mL

10mL

40mL

-80℃


Note: Aliquot into appropriate volumes, store at the recommended temperature and avoid repeated freeze-thaw cycle.

Protocol

【Process and Operations】

1Reagent Preparation

1.1 Compositions equilibration

Before use, dissolve all reagents at room temperature (allow at least 30 minutes for temperature equilibration). For the 384-well plate assay, use 20 μL of reaction mixture (the reagent quantities are listed in the table below). Calculate the required volume prior to preparation accordingly. The following preparation steps are provided for reference only, using a 500-well plate as an example.

Table 1. Reagent Preparation

Composition

Configuration

μL/well

Detection buffer

Add 2 mL of 10× Detection buffer to 18 mL of deionized water, dilute to 1× Detection , and mix thoroughly for later use.

-

Tag1-KRAS[G12D] protein

Take 20 μL of the 100× Tag1-KRAS[G12D] protein stock solution, add 1.98 mL of 1× Detection buffer to dilute it to 1× concentration, and mix thoroughly for later use.

4

Tag2-VHL protein

Take 40 μL of 50× Tag2-VHL protein, add it to 1.96 mL of 1× Detection buffer to dilute to 1× concentration, and mix thoroughly for later use.

4

Antibody Mix

Take 50 μL of the 50× Eu-anti-Tag1 stock solution, add 2450 μL of 1× Detection buffer to dilute to 2.5 mL, and mix thoroughly; take 200 μL of the 12.5× Ac-anti-Tag2 stock solution, add 2300 μL of 1× Detection buffer to dilute to 2.5 mL, and mix thoroughly; combine the two solutions in a 1:1 ratio to obtain the Antibody Mix.

10


1.2 Gradient dilution of the sample

ACBI3 as an example, the dilution solution is 1× Detection buffer. To minimize interference from matrix effects, it is recommended to use a solution with the same matrix composition as the sample being tested; additionally, the sample concentration should be adjusted according to its actual situation.

Table 2. ACBI3 gradient dilution(Adjust according to the actual situation)

ACBI3 final concentration(nM)

ACBI3 preparation concentration(nM)

Dilution

9000

90000

1μL 8mM Daraxonrasib +87.9μL 1× Detection buffer

3000.00

30000.00

10μL +20μL 1× Detection buffer

1000.00

10000.00

10μL +20μL 1× Detection buffer

333.33

3333.33

10μL +20μL 1× Detection buffer

111.11

1111.11

10μL +20μL 1× Detection buffer

37.04

370.37

10μL +20μL 1× Detection buffer

12.35

123.46

10μL +20μL 1× Detection buffer

4.12

41.15

10μL +20μL 1× Detection buffer

1.37

13.72

10μL +20μL 1× Detection buffer

0.46

4.57

10μL +20μL 1× Detection buffer

0.15

1.52

10μL +20μL 1× Detection buffer

Blank

0

0

20μL 1× Detection buffer


2、Sample and control

2.1 Sample:Add 4 μL of Tag1-KRAS[G12D] protein working solution, 4 μL of Tag2-VHL protein working solution, 2 μL of the gradient-diluted sample , and 10 μL of the mixed Antibody Mix sequentially into the 384-well plate.

2.2 ACBI3 : 4 μL of Tag1-KRAS[G12D] protein working solution, 4 μL of Tag2-VHL protein working solution, 2 μL of gradient-diluted Daraxonrasib, and 10 μL of the mixed Antibody Mix sequentially into the 384-well plate.

2.3 Blank:4 μL of Tag1-KRAS[G12D] protein working solution, 4 μL of Tag2-VHL protein working solution, 2 μL of Detection buffer, and 10 μL of the mixed Antibody Mix sequentially into the 384-well plate.

2.4 Negative control 10μL Detection buffer, and 10 μL of the mixed Antibody Mix sequentially into the 384-well plate.

After adding all samples, centrifuge, seal with a cover membrane, and incubate at room temperature for 1 hours.

Table 3. Sample and control spotting process

Daraxonrasib

Sample

Blank

Negative control (NC)

2μL

gradient-diluted Daraxonrasib

2μL

gradient-diluted sample

2μL

1× Detection buffer

10μL 1× Detection buffer

and 10μL Antibody Mix

4μL Tag1-KRAS[G12D] protein

4μL Tag2-VHL protein

10μL Antibody Mix

Seal the plate wells with a sealing film and incubate at room temperature for 1hours.


3、Read Data

The detection was performed on a TR-FRET microplate reader. The excitation wavelength was 320/340 nm, and the emission wavelengths at 620 nm and 665 nm were detected.

【DATA REDUCTION 】

1) Ratio

Ratio = (665/620) ×10000

2) Net signal

Net signal = (Std-NC)/NC×100

Std:the ratio of sample and control

NC: the ratio of negative control

3) CV(%)

CV(%)= Standard Deviation/Mean Ratio × 100%

Data Example

The following data cannot replace experimental results obtained in experiments; they are provided solely for illustrative purposes, and outcomes may vary depending on the plate reader used.

Note: Recommended microplate

(384-well plate, white, shallow wells).